ProtoNet: Site Map.

Warning: pg_exec() [function.pg-exec]: No PostgreSQL link opened yet in /a/protonew-2/z/snap/proto/www-prod/global_functions/inc_global_constants.php on line 34

Warning: pg_exec() [function.pg-exec]: No PostgreSQL link opened yet in /a/protonew-2/z/snap/proto/www-prod/global_functions/inc_global_constants.php on line 59
ProtoNet: Site Map.

Version 6.1


Previous	main page of Site Map	Next

Type: Vertical perspective

Query from cluster card --- Keywords Appearances

A table is shown summarizing statistics of the appearance of different keywords on the proteins of the cluster. One can select specific types of keywords to be shown separately. Each keyword is linked to the source from which it was taken, for additional information.

Cluster A218388

Keywords Appearances.

Type - SwissProt keyword of the protein
Total number of proteins in this cluster (size): 38

Get Keywords Appearances

NumIN - number of proteins in cluster with this keyword
NumOUT - number of proteins with this keyword out of cluster

Keyword description	NumIN	Keyword Deviation from Expectation	Keyword frequency among proteins ( % )		NumOUT	General keyword frequency ( % )
Keyword description	NumIN	Keyword Deviation from Expectation	in this cluster	in children and appearances in merged proteins	NumOUT	General keyword frequency ( % )
10 keywords of SwissProt keyword of the protein
RNA-directed RNA polymerase / all clusters /	31	77.53	81.57%		446	0.41%
Aminopeptidase / all clusters /	5	16.98	13.15%		247	0.22%
Transferase / all clusters /	31	14.24	81.57%		12020	10.56%
Metalloprotease / all clusters /	5	9.89	13.15%		696	0.61%
Zinc / all clusters /	5	4.48	13.15%		2604	2.28%
Complete proteome / all clusters /	1	-3.68	2.63%		34271	30.05%
Hypothetical protein / all clusters /	2	-1.67	5.26%		17074	14.97%
Hydrolase / all clusters /	5	0.75	13.15%		10885	9.54%
Membrane / all clusters /	1	0.26	2.63%		2300	2.01%
Alternative splicing / all clusters /	1	-0.1	2.63%		3338	2.92%


Previous	main page of Site Map	Next